> turfg.mod1 <- aov(chlrfl ~ block + nitrogen + block:nitrogen + years + years:nitrogen) > summary(turfg.mod1) Df Sum Sq Mean Sq F value Pr(>F) block 1 0.510 0.5104 2.3786 0.16158 nitrogen 3 37.325 12.4415 57.9799 9.036e-06 *** years 2 3.816 1.9079 8.8913 0.00927 ** block:nitrogen 3 1.258 0.4193 1.9540 0.19957 nitrogen:years 6 4.154 0.6924 3.2265 0.06460 . Residuals 8 1.717 0.2146 --- Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 > > turfg.mod2 <- aov(chlrfl ~ nitrogen*years + Error(block/nitrogen)) > summary(turfg.mod2) Error: block Df Sum Sq Mean Sq F value Pr(>F) Residuals 1 0.51042 0.51042 Error: block:nitrogen Df Sum Sq Mean Sq F value Pr(>F) nitrogen 3 37.325 12.4415 29.672 0.009896 ** Residuals 3 1.258 0.4193 --- Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 Error: Within Df Sum Sq Mean Sq F value Pr(>F) years 2 3.8158 1.90792 8.8913 0.00927 ** nitrogen:years 6 4.1542 0.69236 3.2265 0.06460 . Residuals 8 1.7167 0.21458 --- Signif. codes: 0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1 > > library(lme4) > > turfg.mod3 <- lmer(chlrfl ~ nitrogen*years + (1|block/nitrogen)) > summary(turfg.mod3) Linear mixed model fit by REML Formula: chlrfl ~ nitrogen * years + (1 | block/nitrogen) AIC BIC logLik deviance REMLdev 56.78 74.45 -13.39 20.29 26.78 Random effects: Groups Name Variance Std.Dev. nitrogen:block (Intercept) 0.0682407 0.261229 block (Intercept) 0.0075926 0.087136 Residual 0.2145833 0.463231 Number of obs: 24, groups: nitrogen:block, 8; block, 2 Fixed effects: Estimate Std. Error t value (Intercept) 3.8500 0.3811 10.103 nitrogen2 1.7500 0.5318 3.291 nitrogen3 2.6500 0.5318 4.983 nitrogen4 3.5000 0.5318 6.581 years5 1.5000 0.4632 3.238 years8 1.2500 0.4632 2.698 nitrogen2:years5 -1.2500 0.6551 -1.908 nitrogen3:years5 -2.0000 0.6551 -3.053 nitrogen4:years5 -0.2500 0.6551 -0.382 nitrogen2:years8 -1.0500 0.6551 -1.603 nitrogen3:years8 0.0500 0.6551 0.076 nitrogen4:years8 -0.1500 0.6551 -0.229 Correlation of Fixed Effects: (Intr) ntrgn2 ntrgn3 ntrgn4 years5 years8 ntr2:5 ntr3:5 ntr4:5 nitrogen2 -0.698 nitrogen3 -0.698 0.500 nitrogen4 -0.698 0.500 0.500 years5 -0.608 0.436 0.436 0.436 years8 -0.608 0.436 0.436 0.436 0.500 ntrgn2:yrs5 0.430 -0.616 -0.308 -0.308 -0.707 -0.354 ntrgn3:yrs5 0.430 -0.308 -0.616 -0.308 -0.707 -0.354 0.500 ntrgn4:yrs5 0.430 -0.308 -0.308 -0.616 -0.707 -0.354 0.500 0.500 ntrgn2:yrs8 0.430 -0.616 -0.308 -0.308 -0.354 -0.707 0.500 0.250 0.250 ntrgn3:yrs8 0.430 -0.308 -0.616 -0.308 -0.354 -0.707 0.250 0.500 0.250 ntrgn4:yrs8 0.430 -0.308 -0.308 -0.616 -0.354 -0.707 0.250 0.250 0.500 ntr2:8 ntr3:8 nitrogen2 nitrogen3 nitrogen4 years5 years8 ntrgn2:yrs5 ntrgn3:yrs5 ntrgn4:yrs5 ntrgn2:yrs8 ntrgn3:yrs8 0.500 ntrgn4:yrs8 0.500 0.500 > anova(turfg.mod3) Analysis of Variance Table Df Sum Sq Mean Sq F value nitrogen 3 19.1012 6.3671 29.6717 years 2 3.8158 1.9079 8.8913 nitrogen:years 6 4.1542 0.6924 3.2265